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Monica Orellana

Research Scientist/Engineer - Principal & Principal Oceanographer

Email

morellan@uw.edu

Phone

206-685-5422

Department Affiliation

Polar Science Center

Education

B.S. Biology, Concepcion (Chile), 1980

M.S. Biological Oceanography, University of Washington, 1985

Ph. D. Biological Oceanography, University of Washington, 1990

Publications

2000-present and while at APL-UW

Microbial ecology of rotten sea ice: Implications for Arctic carbon cycling with global warming

Frantz, C.M., B.C. Crump, S. Carpenter, E. Firth, M.V. Orellana, B. Light, and K. Junge, "Microbial ecology of rotten sea ice: Implications for Arctic carbon cycling with global warming," Microorganisms, 14, doi:10.3390/microorganisms14020482, 2026.

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16 Feb 2026

"Rotten" sea ice, ice in an advanced stage of melt, represents an important but understudied habitat in the rapidly changing Arctic. As Arctic warming accelerates, this late-season ice type will become more prevalent, yet little is known about its microbial inhabitants or their roles in Arctic marine biogeochemical cycles. We examined microbial communities (prokaryote and algal abundance, 16S and 18S rRNA gene and transcript sequencing) and biogeochemical properties of rotten sea ice and earlier-season ice near Utqiaġvik, Alaska, USA. Rotten ice was comparatively warm, isothermal, and largely drained of brine, with extensive, interconnected pore networks linked to melt ponds above and seawater below. Unlike earlier-season ice, fluids saturating rotten ice were vertically homogeneous in pH, dissolved inorganic carbon, prokaryote and phytoplankton abundance, and microbial community composition. However, particulate carbon and nitrogen exhibited strong vertical gradients, with the highest concentrations near the surface. Microbial communities in rotten ice were significantly different from those in earlier-season ice and varied between individual floes. These findings indicate that rotten ice constitutes a distinct microbial habitat and may serve as an important source of nutrient-rich particulate matter in the future Arctic Ocean during the summer melt season.

Metaproteomic analysis decodes trophic interactions of microorganisms in the dark ocean

Zhao, Z., C. Amano, T. Reinthaler, F. Baltar, M.V. Orellana, and G.J. Herndl, "Metaproteomic analysis decodes trophic interactions of microorganisms in the dark ocean," Nat. Commun., 15, doi:10.1038/s41467-024-50867-z, 2024.

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30 Jul 2024

Proteins in the open ocean represent a significant source of organic matter, and their profiles reflect the metabolic activities of marine microorganisms. Here, by analyzing metaproteomic samples collected from the Pacific, Atlantic and Southern Ocean, we reveal size-fractionated patterns of the structure and function of the marine microbiota protein pool in the water column, particularly in the dark ocean (>200 m). Zooplankton proteins contributed three times more than algal proteins to the deep-sea community metaproteome. Gammaproteobacteria exhibited high metabolic activity in the deep-sea, contributing up to 30% of bacterial proteins. Close virus-host interactions of this taxon might explain the dominance of gammaproteobacterial proteins in the dissolved fraction. A high urease expression in nitrifiers suggested links between their dark carbon fixation and zooplankton urea production. In summary, our results uncover the taxonomic contribution of the microbiota to the oceanic protein pool, revealing protein fluxes from particles to the dissolved organic matter pool.

Substrate uptake patterns shape niche separation in marine prokaryotic microbiome

Zhao, Z., C. Amano, T. Reinthaler, M.V. Orellana, and G.J. Herndl, "Substrate uptake patterns shape niche separation in marine prokaryotic microbiome," Sci. Adv., 10, doi:10.1126/sciadv.adn5143, 2024.

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15 May 2024

Marine heterotrophic prokaryotes primarily take up ambient substrates using transporters. The patterns of transporters targeting particular substrates shape the ecological role of heterotrophic prokaryotes in marine organic matter cycles. Here, we report a size-fractionated pattern in the expression of prokaryotic transporters throughout the oceanic water column due to taxonomic variations, revealed by a multi-"omics" approach targeting ATP-binding cassette (ABC) transporters and TonB-dependent transporters (TBDTs). Substrate specificity analyses showed that marine SAR11, Rhodobacterales, and Oceanospirillales use ABC transporters to take up organic nitrogenous compounds in the free-living fraction, while Alteromonadales, Bacteroidetes, and Sphingomonadales use TBDTs for carbon-rich organic matter and metal chelates on particles. The expression of transporter proteins also supports distinct lifestyles of deep-sea prokaryotes. Our results suggest that transporter divergency in organic matter assimilation reflects a pronounced niche separation in the prokaryote-mediated organic matter cycles.

More Publications

Acoustics Air-Sea Interaction & Remote Sensing Center for Industrial & Medical Ultrasound Electronic & Photonic Systems Environmental & Information Systems Ocean Engineering Ocean Physics Polar Science Center
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